Showing posts with label beer. Show all posts
Showing posts with label beer. Show all posts

Saturday, 17 October 2015

Second Aussiversary musings

Wednesday this week was our second Aussiversary, having stepped off the plane to start our new adventure two years ago.

To celebrate, here are some of things I have learnt over the past two years (in no particular order):

Comment below if you think I’ve forgotten anything important - I’m sure there’s lots!

Monday, 13 October 2014

Every conference should be like ABiC 2014 (#ABiC14)

Last weekend, I attended the inaugural Australian Bioinformatics Conference (ABiC 2014) in Melbourne. (Twitter tag #ABiC14 so as not to be confused with the ABIC Foundation conference in California.) I’ve been to quite a few conferences in my time, including a fair few bioinformatics conferences. The latter (in my experience) are often quite dull affairs - good for meeting people and “networking” but not so good for interesting science beyond the invited keynote speakers.

Happily, ABiC14 went far beyond expectations. I signed up because it is important for me as a relative newbie to meet more Australian bioinformaticians. This was accomplished but was only the start of the positive experience of this conference. In fact, the conference was so good that I thought it worth posting its successful attributes/decisions as a model for future conferences (and reminder to myself should I organise one).

Here then, in approximate chronological order, are my top take-home quality attributes of ABiC 2014:

Organisation. The conference website was well organised and clear prior to the meeting. The program outline was available in good time, enabling planning, with abstracts etc. available in a single PDF. The only real improvement I can think of would be to have a printed program (just the outline, not full abstracts) provided upon arrival. However, because there were no last minute changes to the program, this turned out to be a moot point.

Coffee. Science in general, and bioinformatics specifically, is fuelled by coffee. The Aussies do coffee well and ABiC 2014 had the genius idea of a sponsored barista who made a decent cup of fresh coffee to order. I took advantage of this on arrival, which really set me up for the morning session and got the whole thing off to a great start.

Venue. The Royal Children’s Hospital was a great venue. Access by public transport was easy. The lecture theatre was comfortable and a good size. Eduroam provided free WiFi access (even if HTTP sites were unavailable for some reason). Coffee breaks, lunch, and poster sessions were near to the lecture theatre and promoted mingling.

Size. I’m not sure what the final number of delegates at ABiC 2014 was but for me it was the perfect number. (I would guess around 180+/-.) There were enough people for some interesting diversity, presentations and posters but not too many to actually get to chat to people and visit all the interesting posters.

Interesting Science! This is clearly one of the most important aspects of a good conference but sadly one that is often not achieved by a bioinformatics meeting (beyond the keynotes). I think there were several contributing factors to this. First, there were not too many talks and no parallel sessions. There were twenty talks in total, in six sessions of 3-4 talks of 10-50 mins each. Each session kicked off with an invited speaker. By keeping the quantity down, the quality of the talks - and stamina of the audience - was maintained at a very high level. I was expecting to “zone out” and struggle to maintain concentration a few times but I found my attention captured by each speaker. Talk quality was further enhanced by…

No published conference proceedings. Because of the large computer science community within bioinformatics, a lot of bioinformatics conferences have the submitted work published as papers in conference proceedings or a journal special issue. Even when the journal is a good one, this massively decreases the likelihood of getting interesting science, which will normally be either (a) published in a higher impact biology or general science journal, or (b) not yet be ready for publication. As a result, talks tend to be more technical and specialist… and boring. ABiC 2104 avoided this trap.

Food. You don’t go to a conference for the food but having tasty snacks at the breaks and at lunch does add to a general vibe of happiness and satisfaction.

Beer. Scientists and computer geeks are not always the most extrovert of individuals, and a little something to grease the wheels of social interaction never goes amiss. The ABiC committee went as far as to establish the beverage categories of choice with a pre-conference questionnaire. They gained extra brownie points from me for the presence of Fat Yak among the offerings.

Posters. This is largely a composite of the above points but the poster session was one of the better ones I have attended. For a start, the posters were up for the entire conference. It really bugs me when conferences do not do this and it all comes down to choice of venue - so well done ABiC for selecting a venue with this capacity. Furthermore, the poster location had great access - being a wide corridor - and was between the auditorium and the morning/afternoon drinks and snacks, maximising quality exposure. Furthermore, restricting the number of talks saved lots of interesting science for the posters!

Conference Dinner. If you are lucky, the conference dinner will be one of the best networking points of a conference, as your table represents a fairly captive audience with whom you have to interact. Nevertheless, conferences are generally charged to grants and researchers are on a budget, so it is frustrating to be forced to spend a load of cash on a meal that rarely lives up to the expectation of the price tag. ABiC 2014 took a pragmatic solution of booking out a restaurant and bar, and everyone paying for their own meal and drinks ordered off a standard single course menu. It worked really well. The food was good (but not excessive) as was the company. There was only one course but you never need more than that when there are morning and afternoon snacks in the breaks.

Timing. As far as I could tell, the talks generally seemed to stick to time, so coffee/lunch breaks were not truncated. Again, by keeping the number of talks (and talks per sessions) low, this was easier to achieve. Nonetheless, it's still something that is not achieved by all conferences. (I remember one conference in which my talk started 5 minutes after it was supposed to finish!)

Twitter. I’m a bit sporadic on Twitter at the best of times and not entirely convinced that live tweeting in a conference is not generally more of a distraction than a benefit - for those present, at least. However, I did enjoy having the #ABiC14 twitter feed open during the meeting and felt that it added to the sense of community. Of course, the aforementioned interest of the talks (and the smallish size of the meeting) limited the distraction.

As of the end of ABiC 2014, there was no plan for an ABiC 2015. I, for one, really hope that there is one - and that the organisers are able to stick to the same model.

Tuesday, 24 June 2014

A pale ale beer tasting

The Saturday before last, we were with friends watching England experience their first (but least upsetting) sporting defeat of the past couple of weeks: a tight one point Rugby Union loss to the All Blacks. Despite the defeat, it was a good game and made all the more enjoyable by a fine array of beverages.

In fact, the disappointment of the rugby was over-shadowed by the impromptu pale ale beer tasting that accompanied it. The line up is above, and started with Haymaker, an English import from Hook Norton in the Cotswolds. It was quite strong for a pale ale, at 5% alcohol, but packed full of flavour. Yum.

After that it was on to the Aussie beers. We’d brought some Beechworth pale ale from Bridge Road Brewery, which was good and fruity with a quite hoppy taste. Another craft brewery to add to my increasing watchlist and another fine pale ale to add to the existing favourites. One fifty lashes from James Squire is already on that list, being one of the first decent* beers that I discovered in Australia. (*To my taste.)

Only the final beer let the side down: Coopers was by far and away the worst and, after the others, I have nothing good to say about it. If only it could have been replaced with Fat Yak from Matilda Bay, it would have been a first class collection!

Sunday, 26 January 2014

A pair of Matilda Bay's finest Aussie beers for Australia Day

It’s Australia Day so it seems appropriate to post a celebration of something Australian: Matilda Bay beer. Australia Day marks the anniversary of the Brits arriving at Sydney Cove, not far from where I type this, in 1788. Almost two centuries later Matilda Bay Brewing Company established “Australia’s original craft brewery” (according to them) in Melbourne.

I must admit that I was a little fearful of the quality of Aussie beer before moving here; I was routinely disappointed by the offerings during a holiday in 2004 and the less said about the stuff that makes it over to the UK the better. I was happy to be proved wrong! The craft beer industry seems to be thriving and there are some really good ones about. Two of my favourites so far are from Matilda Bay: Fat Yak Pale Ale and Minimum Chips Golden Lager.

Minimum Chips is best on a hot, sunny day but Fat Yak is a fine all-rounder that’s good for any occasion. I look forward to sampling some of the other in the range! (James Squires and Mountain Goat have some good ones too.)

Monday, 2 December 2013

Chilling with a Mountain Goat at Papa Gede's bar

Today I moved all the textbooks and folders that had been shipped over from the UK into my office from our apartment. I was therefore thoroughly in the mood for a nice cold beer after work. Happily, there were already plans to meet a friend and she took us to Papa Gede's bar at 346 Kent St in Sydney CBD, which can be found at the end of a very unassuming little laneway.

Although they are new to me, Papa Gede’s is a fairly new addition to the bar scene in Sydney and it’s a good one. The interior is cosy and comfortable and they were playing very funky music too, which the friendly staff identified as the Budo’s band (also new to me). They also made a fine beer recommendation in the form of Mountain Goat hightail ale: malty and tasty but also a thirst quencher.

Both beer and bar (and Budos’ band) are recommended!

Thursday, 5 July 2012

A trio of piddle

It's American Independence Day and so (for some reason) I thought I should publish a distinctly British post... and what can be more British that a double entendre (no, they don't have to be rude) and some great beer. These fine ales are all products from the Dorset Piddle Brewery. I particularly recommend the Jimmy Riddle and Silent Slasher!

PS. Thanks go to the Flying Fish for the great birthday present! (And apologies for being a dumbass and getting that wrong in the original post. In my defence... beer kills brain cells! :op)

Saturday, 17 March 2012

Happy Paddy's Day!

Or, Happy St Patrick's Day, if you are feeling more formal. Maybe even "St Pat's". But not Happy "St Patty's Day". Never "St Patty's Day"!! (No, I'm not Irish but having lived in Dublin for six years, I am pretty sure about this.) He's not a burger, he was a 5th Century Amazing Maurice (or, more accurately, Keith) of snakes. (You might need to be a Pratchett fan with a cursory knowledge of post-glaciation species distributions to get that one.)

That is almost my last word on the matter, other than to share this rather good and geeky St Patrick's Day YouTube song that is doing the rounds, combining two of my favourite things: beer and science. I like the fact that the singer looks like he's got in the spirit and had a jar or two before the performance. My only real criticism... it's not the black stuff in the glass.

SPOILER ALERT! Here are the lyrics:
In the year of our lord eighteen hundred and eleven
On March the seventeenth day
I will raise up a beer and I'll raise up a cheer
For Saccharomyces cerevisiae
Here's to brewers yeast, that humblest of all beast
Producing carbon gas reducing acetaldehyde
But my friends that isn't all -- it makes ethyl alcohol
That is what the yeast excretes and that's what we imbibe

Anaerobic respiration*
Also known as fermentation
NADH oxidation
Give me a beer

[CHORUS]

My intestinal wall absorbs that ethanol
And soon it passes through my blood-brain barrier
There's a girl in the next seat who I didn't think that sweet
But after a few drinks I want to marry her
I guess it's not surprising, my dopamine is rising
And my glutamate receptors are all shot
I'd surely be bemoaning all the extra serotonin
But my judgement is impaired and my confidence is not

Allosteric modulation
No Long Term Potentiation
Hastens my inebriation
Give me a beer

[CHORUS]

When ethanol is in me, some shows up in my kidneys
And inhibits vasopressin by degrees
A decrease in aquaporins hinders water re-absorption
And pretty soon I really have to pee
Well my liver breaks it down so my body can rebound
By my store of glycogen is soon depleted
And tomorrow when I'm sober I will also be hungover
Cause I flushed electrolytes that my nerves and muscles needed

Diuretic activation
Urination urination
Urination dehydration
Give me a beer

[CHORUS]

I also love the little disclaimer added by the author, cadamole, marked with the asterisk:
*Actually, this isn't true. While both anaerobic respiration and fermentation occur without the use of oxygen, anaerobic respiration utilizes the electron transport chain to generate ATP, while fermentation does not. My bad. I would have remembered that if I wasn't trying so hard to rhyme. A new corrected version is now up on my channel: http://www.youtube.com/watch?v=L6dzUOYTQtQ
Dedication to accuracy such as this should really be rewarded, so go on... click on the link and give this guy some more views/likes. It's what St Patrick would have wanted.

Sunday, 9 October 2011

A storming beer from bath ales

After a reasonable amount of procrastination, I decided not to the gym today. After having an uncharacteristic cooked breakfast this morning and coffee & cakes this afternoon, this is not a decision I am entirely proud of. In my defence, I've been twice this week, which is good for me.

Against my defence, I decided to have a beer instead. Back in my defence, it is a very tasty beer! "Barnstormer" by "bath ales" is a dark, rich bitter, perfect for a (slightly) wintery evening.

Here's what they say:

"Rich in fruit with hints of chocolate, this full-bodied dark ale is a complex but deeply satisfying beer."

Sums it up pretty nicely, I think.


Location:Southampton, UK