Sunday, 6 January 2013

Cast your pearls to the teapigs!

Another one of my Christmas presents this year was a packet of Jasmine Pearls teabags (or "tea temples") from teapigs. I am a big fan of jasmine tea and I have to say that the teapigs variety is very tasty indeed! It looks pretty too: a little pyramid of tea.
Mmmm... tea!

Friday, 4 January 2013

Getting touchy but not feely with touchscreen gloves

Having a waited almost a year to blog praises of one of last year's Christmas presents (my Urban ears headphones, which (ironically) have just broken and need fixing/replacing ☹), I thought I would be a bit quicker off the mark this year!

I'd been pondering the merits of touchscreen gloves for a while, as I do use my iPhone a lot on the way too and from work and it is mildly inconvenient (and sometimes cold) to have to de-glove to change track, take a photo or read a message. I'd never actually got round to looking into them, though, and seeing if they were more than just a gimmick, or even comfortable as gloves. (I wasn't even sure what the fingers were made of, to be honest.) It was therefore great to get a pair for Christmas - along with some good opportunities to try them out straight away in a chill December Dublin.

My initial reactions are good and they work really. They're definitely not as responsive as naked flesh but then you wouldn't expect them to be. I think this is in part you cannot really feel the contact in the same way as you can with exposed fingers, so you cannot rely on touch when typing, for example, to know that your press has registered. Your fingers are also obviously fatter in gloves, so you cannot be quite so sure that you are pressing the desired buttons. As a result, you have to rely more on sight, which slows things down a bit, but I have not experienced any frustration due to my touches failing to be detected.

The drawbacks are pretty minor and I would definitely recommend them for the winter touchscreen user. For most iPhone activities when you'd be wearing gloves, it's still faster than taking regular gloves off and then putting them back on again - plus, of course, there's no need to expose your hand(s) to the cold. They function well as gloves too! Now I just need the weather in Southampton to turn cold again, so I can use them some more!

Thursday, 3 January 2013

What I've learnt from another year of blogging

I was hoping to do a bit of an End of Year review for the blog with the top posts of 2012. Unfortunately, blogger does not seem to be able to provide annual stats - it's limited to the last day, week, month or all time. Google Analytics is more useful but, unfortunately, I only set it up on the blog in April so I cannot use that either. Instead, here are the top six posts from 2012 based on all time stats at the beginning of January:

#PostDateViews
1Kumala Zenith Merlot/Cab Sav/Shiraz - another bargain red
6 Feb 2012
381
2There's nothing scary about the Spice Kittens
16 Oct 2012
360
3Tim Minchin talks to Caitlin Moran
30 Aug 2012
273
4How to root a phylogenetic tree
7 Jun 2012
183
5A fan fixes Star Wars (Machete Order)
7 Oct 2012
181
6Finding Nemo's sex-changing father
18 May 2012
159

So, what have I learnt from this year's blogging?

✏ People like wine. (OK, I already knew that.) Although I do not really consider The Cabbages of Doom to be a "science blog" per se, I am a bit disappointed that the science posts have not rated higher. It's especially embarrassing to see a wine post top the bill as I don't really know much about wine and the posts show that! (They're really just for me to keep track of wine I like!)

✏ Sex, celebrities and kittens sell. Also not really surprising, I guess - this is the internet - but three of the top six feature sex, celebrities and kittens. Not things I blog about often but good to remember if I ever feel the viewing stats need a boost!

✏ Education, education, education. I've blogged before that Education is the key to impact and it seems to hold true for blog posts too - mine at least. The top science post was the education-related How to root a phylogenetic tree and the second also stemmed from a lecture. Still, good motivation to blog some more lecture-related material when I have the chance.

✏ Blog what you like. The philosophy behind my blog has always been "because the internet has a better memory than I do". I don't think it is easy - or that healthy - to try and predict what other people will be interested in and write about that, unless you are trying to blog professionally, of course. Given that I do not think I would have predicted any of the above as top posts, I think this is a good philosophy to continue.

✏ It doesn't have to be fresh. Especially with science, it sometimes feels like a race to "get in on the action". The more I blog, the more I feel it's best to leave that to the pros. There is something nice about returning to the scene after the dust has settled and there's less pressure to try and be original.

✏ Quality not Quantity / Fun not Frequency. There was a period when I got a bit obsessed about trying to knock out one post a day. It did not last too long and it killed some of the fun. One of my favourite blogs, coelsblog, probably posts one or two times a month on average. This is a hobby, not a job, so it's perfectly OK for it to be sporadic.

✏ Comment on other people's blogs. I don't mean leave snarky troll comments all over the internet but making positive contributions to other people's comment threads is a great way to get a few extra page views heading your way from those with similar interests. Even without the carrot of extra page views, I still recommend leaving comments that encourage posts you have enjoyed - as a blogger, I know how nice (although sadly rare for me!) to get them. (Desire for feedback is also part of the point of blogging.) Such conversations can also provide good inspiration for future posts. (On the subject of other blogs... more end of year blogging wisdom can be found at Under The Banyan.)

✏ Be polite. Attack the idea, not the person. Or, better still, question the idea. (Usually, the best defence is not offence.) Both when blogging and commenting, always remember than you are effectively self-publishing to the world. I'm sure I don't always get it right but I try to stay mindful of (and avoid) anything that might come back and bite me later, hence my blog disclaimer: "Any unsourced opinions on this site are my own. I sometimes get things wrong and will be happy to amend my position in the light of new information."

Is technology ruining the moment?

Like many people, I was at home when the New Year was rung in, so I could only watch the fireworks on TV. They were, it must be said, pretty spectacular (although I actually thought there were too many at times) and I felt a twinge of jealousy towards all those watching it live above their heads.
Jealous, that is, until the camera panned across said crowd and revealed all the upturned faces, staring into the LCD screens of their cameras and smartphones.
Is the memory of the 21st Century human really so bad that we have to try and capture every event and every moment on a digital device, however inferior that would be to the experience itself? (Even the best camera equipment is not going to have a dynamic range or field of vision to challenge the Mark I human eyeball.) I could almost understand it if the event was not being televised and recorded for prosperity anyway. (It's on BBC iPlayer, which is where the screen grabs are from, if you missed it.)

I think I'm going to add another New Year's aspiration:

☑ Enjoy the moment. Learn to recognise when the view or the moment is just too special or breathtaking to be distracted by trying to get the perfect shot for the future.

Hmmm. That's two rants in a row. Must make the next one a positive post!

It's not cool to label your diagram "hot pink"

One of our assignments has students making pretty PDB structure diagrams using UCSF Chimera. Some of them are very good at it too. (The picture left is from the Chimera Image Gallery, not a student.)

I am always amazed by some of the figure legends, though, which feature colour descriptions such as "hot pink", "forest green" and "dodger blue". This is not so bad when there is only one pink, green and blue in the diagram - it can just be written off as idiosyncratic and superfluous. When I am asked to contrast "cornflour blue" with just "blue" in the same image, however... well, now we've crossed a line into downright unhelpful. Stick to "light blue" and "dark blue" - and if that's not clear enough, then pick another colour!

Wednesday, 2 January 2013

New Year's Aspirations for 2013

I'm not a great believer in New Year's Resolutions. After all, if there's something you should change in your life, do it when you realise it, don't wait until the end of the year. There is also the potential issue of self-recrimination etc. if you fail to keep them.

At the same time, it is useful to reflect on stuff from time to time and New Year provides a good time for this and plenty of time sitting around to think about it too! I can't say I've given it a lot of thought but I did think it would be worth penning a few New Year's aspirations. (Not because its anyone else's business, of course, but I do think I am more likely to do something if I've publicly stated it - not that it worked with the gym!)

☑ Make more time for reading. I made a quite long Christmas reading list of interesting papers and stuff but did not do a very good job at getting through it and it's back to work tomorrow. I also got a few books for Christmas, which all look good. I'm also behind with work-related reading. Must. Read. More.

☑ Make more time for writing. I've got a few papers and a book chapter that need writing. Episodes of Mystic Mog and the Exploding Tortoise have also been decreasing in frequency down to a disappointing 4 in December. There are a number of contributing factors to this but one is clearly not setting aside time to write.

☑ Blog more papers. Although this is not specifically a science blog per se, one of the motivations behind blogging was to try and get better at science communication. The number of science-related posts is not too bad (about 1 in 3) but I could definitely do with blogging a few more original papers, which will hopefully also help with the reading and writing.

☑ Cook more meat. I don't intend to eat more meat. I'm never going to be vegetarian for a number of reasons but nor do I see the need to eat meat every day and tend to cook quite a lot of vegetarian meals. When I do cook meat, however, it tends to be safe recipes erring on the side of boring. This is largely because I lack experience and the confidence that comes with it. One of this year's Christmas presents was The River Cottage Meat Book and I intend to make good use of it!

☑ Budget. I don't consider myself particularly irresponsible with money but there is always room for improvement. I've got reasonably good of keeping track of my expenses in 2012 but 2013 is time to convert that knowledge into some proper budget planning. Maybe.

☑ Gain control of my inboxes. I had a bit of a purge a while back but my email is still swamped by loads of junk mail. Time for another purge, I think. I think it's also time to try and make Facebook more active and less passive - it's actually easier to keep track of messages in FB than email sometimes. Unless I really get my inbox in shape, that is.

Not the most inspiring list (or interesting post!) in the world but it will be interesting (for me) to revisit these in a few months and see what progress I am making. It doesn't hurt to have aspirations.

Tuesday, 1 January 2013

My Top Tunes of 2012

Every now and then, I like to exercise my geekiness by writing a program to do something trivially unimportant just for the fun of it. One such exercise is a little Python program for processing iTunes playlist exports. It's still in early development (and doesn't handle accented text properly) but it's good for calculating crude summary stats for Albums/Artists and differences between exports at different times. I therefore thought that I'd compare my iTunes library as of 27/12/12 with an export almost exactly a year ago (20/12/11).

The New Year period is always full of "best of" lists, so here are the resulting "Best of 2012" lists for my iTunes library.

Top 20 Tracks (Most plays) of 2012

#NameArtistAlbumPlays
1WalkFoo FightersWasting Light28
2The English WayFightstarBe Human (Deluxe Edition)27
=ZihautanejoFightstarOne Day Son This Will All Be Yours27
4No More HeroesSlashApocalyptic Love (Special Edition)26
=One Day SonFightstarOne Day Son This Will All Be Yours26
6FloodsFightstarOne Day Son This Will All Be Yours25
7CheersThe WildheartsCoupled With24
8Our Last Common AncestorFightstarOne Day Son This Will All Be Yours22
9Apocalyptic LoveSlashApocalyptic Love (Special Edition)21
=Standing in the SunSlashApocalyptic Love (Special Edition)21
=We Apologise For NothingFightstarOne Day Son This Will All Be Yours21
12Mvua NyeusiFightstarBe Human (Deluxe Edition)20
=Amaze UsFightstarOne Day Son This Will All Be Yours20
14Youre a LieSlashApocalyptic Love (Special Edition)19
15Dark Star (Acoustic Version)HypnogajaDark Star - EP18
16One Last ThrillSlashApocalyptic Love (Special Edition)17
=Thank You God (Live)Tim MinchinTim Minchin and the Heritage Orchestra (Live)17
18AnastasiaSlashApocalyptic Love (Special Edition)16
=Mazel Tov CocktailThe WildheartsChutzpah16
=Hazy EyesFightstarGrand Unification16
=Wake UpFightstarGrand Unification16
=See The WorldGomezHow We Operate16
=Floods [Instrumental]FightstarOne Day Son This Will All Be Yours16
=The Fence (Live)Tim MinchinTim Minchin and the Heritage Orchestra (Live)16
=Down Down DownCharlie SimpsonYoung Pilgrim16

The list is dominated by Fightstar tracks, which is perhaps not surprising because I discovered them around the time of the first export in December 2011. A few Avenged Sevenfold tracks almost made it but largely missed out due to only being added in the last couple of months, although (along with many of these) they feature in the Top Albums (below).

I obviously recommend all of these tracks but I think that three deserve a special mention. See The World by Gomez is not just in my Top 20 plays for 2012, it's my most played track of all time. This is partly because my wife also loves it (it was our leaving music at our wedding) but mostly because it's just a damn fine track. Walk by Foo Fighters is quite possible the perfect track in my book. I just cannot think of any way to make it better. I love it! The final track with a special mention is Floods by Fightstar, which not only appeared in the top 10 but the Instrumental version also appeared in the Top 20. (Combined, they would be the Number 1 song of 2012.)

Top 10 Albums (Plays per Track) of 2012

#AlbumArtistPlays/Track
1Apocalyptic Love (Special Edition)Slash15.7
2NightmareAvenged Sevenfold12.3
3Grand UnificationFightstar10.9
4Dark Star - EPHypnogaja10.7
5One Day Son This Will All Be YoursFightstar9.2
6Cast Of ThousandsElbow8.8
7Be Human (Deluxe Edition)Fightstar8.7
8Avenged SevenfoldAvenged Sevenfold8.1
9Waken The FallenAvenged Sevenfold7.7
10Giftes 1 & 2Antlered Man7.4

For anyone who's read my previous music posts, the rock-heavy nature of this list will come as no surprise. Somewhat reassuringly, quite a few of them have featured in posts (linked from the Artists, below - the Album names link to Amazon in case you want a listen). Hypnogaja and Antlered Man are lined up for posts in 2013.
I actually discovered Hypnogaja when looking for Apocalyptic Love by Slash as they have a track called Apocalyptic Love Song. That's not on the six-track Dark Star EP but it was my access point to quite an extensive catalogue on emusic. (I'm not sure if an EP counts as an album but six tracks seemed like enough to warrant inclusion.)

Top 10 Artists (Most listened to) of 2012

#ArtistPlaysTracks
1Fightstar52055
2Avenged Sevenfold32947
3Hypnogaja28543
4Slash27543
5Elbow23936
6The Wildhearts17777
7Muse16296
8God Is an Astronaut14240
9Tim Minchin12833
10Foo Fighters11761

Again, many of these have featured in previous posts (linked in the table) and the rest are definitely deserving of them. I guess that God is an Astronaut - another emusic discovery - deserves a special mention here as the only Artist not to feature a top song or album. They just have a very solid and appealing catalogue across the board.

Muse also stand out a bit as I have almost 100 tracks by them. Crazy! I knew I was a fan but did not realise I had quite so many. (Most of them are quite old, which is why they are not higher up the charts, I fancy.) They're not top overall in this respect, though: The Red Hot Chili Peppers (159 tracks) and Blur (113) both beat them. Green Day (80) comes in fourth and probably should have featured, except that I have been holding off getting ¡UNO!, ¡DOS! and ¡TRÉ! in case I got them from Christmas. (I didn't.) Lots to look forward to in 2013!